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Read, check, and format data

Functions for importing, checking, and formatting input data.

readASRcont()
Read continuous monitoring data from an external file
readASRdqo()
Read data quality objectives from an external file
readASRusgs()
Retrieve USGS time series data for overlay in editASRflag
checkASRcont()
Check continuous monitoring data
checkASRdqo()
Check data quality objectives
formASRcont()
Format continuous data
formASRdqo()
Format data quality objectives

Quality control

Functions for flagging suspect and failed data based on user-defined data quality objectives.

anlzASRflag()
Plot QC flag results for a continuous monitoring parameter
editASRflag()
Interactive editor for continuous monitoring data
utilASRflag()
Flag continuous monitoring data with QC criteria
utilASRflagall()
Apply QC flags to all parameters in continuous monitoring data
utilASRflagflatline()
Apply flatline QC flag
utilASRflaggross()
Apply gross range QC flag
utilASRflagrleflat()
Compute consecutive run lengths for flatline detection
utilASRflagroc()
Apply rate-of-change QC flag
utilASRflagspike()
Apply spike QC flag
utilASRflagupdate()
Update QC flag severity

Bulk removal

Functions for trimming the start and/or end of a deployment across all parameters at once.

editASRbulk()
Interactive bulk removal editor

Drift correction

Functions for correcting instrument drift in continuous monitoring data.

editASRdrift()
Interactive drift correction editor
utilASRdrift()
Apply linear drift correction to a continuous monitoring parameter

Combined workflow

Runs the bulk removal, drift correction, and flag-review editors in sequence through a single launcher.

editASRworkflow()
Combined bulk removal, drift correction, and flag review workflow

Utility functions

Additional miscellaneous functions used internally by other functions.

utilASRimportcont()
Import continuous monitoring data from an Excel file
utilASRopencheck()
Check if an Excel file is open and execute a read function

Supplementary datasets

Supplementary datasets for the read, quality control, and analysis functions.

paramsASR
Master list and units for acceptable parameters